š” Wrong Head, Right Refund: Delhi High Court Backs Refund for GST Paid Under Wrong Head
- Bhagya Lakshmi
- May 13
- 3 min read
šļø Key Case Law:
M/s. Excel Buildtech Pvt. Ltd. vs. Commissioner of CGST,
Delhi South Court:Ā Delhi High Court
Date of Order:Ā 15 April 2024
Citation:Ā 2024-VIL-225-DEL
š Summary of the Case:
The petitioner, Excel Buildtech Pvt. Ltd., had wrongly paid CGST and SGSTĀ treating a transaction as intra-State.
Later, it was established that the transaction was actually inter-State, and IGSTĀ was the correct tax.
The company paid IGST correctly and applied for a refund of CGST and SGST.
The department rejected the refund on the grounds that the mistake was of the taxpayer.
āļø Court's Ruling:
The High Court held that Section 77 of the CGST ActĀ and Rule 89(1A)Ā clearly support refunds in such cases.
Mistakes in head of tax paymentĀ (CGST/SGST vs IGST) are covered under the law.
It directed the department to process the refund within 4 weeks.
š§¾ Real-Life Example: Wrongly Paid IGST Instead of CGST + SGST
š§āš¼ Company: ABC Traders ā Registered in Telangana
š¦ Transaction: Supply of goods to a buyer in HyderabadĀ (same state)
š What Actually Happened:
Return | Status | What was Done |
GSTR-1 | ā Filed correctly | Supply shown as intra-StateĀ with CGST + SGST breakup |
GSTR-3B | ā Error | Entire tax paid as IGST, due to a drop-down selection mistake |
Correction | ā Done | Correct CGST and SGST paidĀ in next monthās return |
Refund Required | ā Yes | IGST wrongly paidĀ must now be refunded |
āļø Legal Basis for Refund:
Law | Description |
Section 77(1), CGST Act | Refund when CGST/SGST is wrongly paid on inter-State supply |
Section 19(1), IGST Act | Refund when IGST is wrongly paid on intra-State supply |
Rule 89(1A) | Enables refund for wrong-head tax, time limit: 2 years from correct payment |
CBIC Circular 162/18/2021-GST | Clarifies the process for refund in such situations |
š» Step-by-Step Refund Process (When IGST was wrongly paid instead of CGST + SGST)
šŖ Step 1: Login and Navigate
Login to https://www.gst.gov.inGo to: Services ā Refunds ā Application for Refund
šŖ Step 2: Select Refund Type
Choose: āRefund on account of tax paid under wrong headā
šŖ Step 3: Provide Details
Month of GSTR-3BĀ with the error
Invoice detailsĀ (same ones disclosed in GSTR-1)
Amount of IGST paid
Correct CGST + SGST challans
š Remarks Example:
āIGST wrongly paid instead of CGST + SGST. Supply was intra-State and disclosed correctly in GSTR-1.ā
šŖ Step 4: Upload Documents
GSTR-1 summary (showing intra-State supply)
GSTR-3B summary
Correct payment challans
Reconciliation statement
Declaration (no unjust enrichment)
šŖ Step 5: Submit
Submit with DSC or EVCTrack application under āRefunds ā Track Application Statusā
šŖ Step 6: Refund Order
Refund is sanctioned via Form RFD-06Bank credit is done upon final processing.
š Common Scenarios and Refund Eligibility:
Scenario | Tax Paid | Correct Tax | Refund of | Applicable Section |
Inter-State wrongly treated as Intra-State | CGST + SGST | CGST + SGST | Section 77 ā CGST Act | |
Intra-State wrongly treated as Inter-State | IGST | CGST + SGST | IGST | Section 19 ā IGST Act |
š§ Practical Challenges & Solutions:
ā What if Portal Asks for Invoice-wise Details Again?
ā Solution: Re-enter the same invoice detailsš Add remark: āInvoice already filed correctly in GSTR-1; refund claimed due to GSTR-3B head error.ā
ā Do You Need to Revise the Invoice?
š« No. GST law does not require reissuance of invoices in such cases. Just pay the correct taxĀ and claim refund under Section 19Ā or 77.
š Timeline Alert:
Refund must be filed within 2 yearsĀ from date of correct tax paymentĀ (i.e., CGST + SGST in this case).
If error occurred before 24.09.2021, the 2-year time starts from that dateĀ as per CBIC circular.

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